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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841755.1_cds_XP_016508081.1_21140
CDS Infomation

[gene=LOC107825707] [db_xref=GeneID:107825707] [protein=aspartate aminotransferase, cytoplasmic-like] [protein_id=XP_016508081.1] [location=complement(join(22910..22994,23343..23463,24406..24500,24641..24762,25354..25491,25621..25784,26886..27006,27117..27216,27851..27934,28014..28075,29178..29249,29749..29937))] [gbkey=CDS]
Sequence

ATGAACATGTCACAACAATCACCGTCACCGTCCGCTGACCGGAGGTTGAGTGTTCTGGCG
AGACACCTTGAACTGTCGTCCTCCGCCACCGTCGAATCCTCTATCGTCGCTGCTCCTACC
TCTGGAAATGCTGGAACCAACTCTGTCTTCTCTCACATCGTTCGCGCTCCCGAAGATCCT
ATTCTCGGCGTCACTATTGCTTACAATAAAGATAGTAGCCCCATGAAGTTGAATTTGGGA
GTTGGTGCATATCGCACAGAGGAAGGAAAACCTCTTGTTTTGAATGTTGTAAGACAAGCA
GAGCAGCTACTAGTAAATGACAGGTCTCGCGTTAAAGAGTACCTATCTATTACGGGACTG
GCAGACTTCAATAAATTGAGTGCTAAGCTGATACTTGGCGCCGACAGCCCCGCTATTCAA
GAGAACAGAGTAACAACTGTGCAGTGCTTGTCTGGCACAGGCTCATTGAGGGTTGGAGCT
GAATTTTTGGCTCGACATTATCATCAACGCACAATTTATATTCCCCAACCAACATGGGGA
AACCACCCAAAAGTTTTCACTTTAGCTGGATTATCGGTAAAGAGTTACCGCTACTATGAT
CCAGCAACTCGTGGACTCAATTTTCAAGGTTTGTTGGAAGACCTTGGATCTGCTCCATCG
GGAGCGGTAGTGCTACTTCACGCTTGTGCCCATAACCCCACTGGTGTTGATCCAACCATT
GATCAGTGGGAGCAAATTAGGAGATTGATGAGATCAAGAGGATTGTTGCCCTTCTTTGAT
AGTGCATATCAGGGCTTTGCCAGTGGAAGCCTAGATACAGATGCACAGTCTGTTCGCATG
TTTGTGGCAGATGGAGGTGAAGTACTTGTTGCTCAAAGTTATGCAAAGAATATGGGGCTT
TATGGTGAACGTGTTGGAGCTCTAAGCATTGTCTGCAGGAATGCTGATGTGGCGAGCAGA
GTTGAGAGCCAGCTGAAGTTGGTGATTAGGCCAATGTATTCCAATCCGCCCATCCATGGT
GCGTCAATAGTTGCCACAATCCTTAAAGACAGAAACATGTACCGTGAATGGACCCTTGAG
CTGAAAGCAATGGCTGATAGAATCATCAGAATGCGTCAGCAATTATTTGATGCTTTACGT
GCTAGAGGTACACCTGGTGACTGGAGTCACATTATCAAGCAGATTGGAATGTTTACTTTC
ACGGGACTTAACTCAGAGCAAGTTGCCTTCATGACCAAAGAGTACCACATCTACATGACA
TCAGATGGACGCATCAGTATGGCAGGTCTGAGCTCCAGGACAGTTCCACATCTAGCAGAT
GCCATACATGCTGCTGTCGCTCGGGCTCGTTGA

Peptide Sequence

PEP ID

XP_016508081.1
PEP Infomation

PREDICTED: aspartate aminotransferase, cytoplasmic-like [Nicotiana tabacum]
Sequence

MNMSQQSPSPSADRRLSVLARHLELSSSATVESSIVAAPTSGNAGTNSVFSHIVRAPEDP
ILGVTIAYNKDSSPMKLNLGVGAYRTEEGKPLVLNVVRQAEQLLVNDRSRVKEYLSITGL
ADFNKLSAKLILGADSPAIQENRVTTVQCLSGTGSLRVGAEFLARHYHQRTIYIPQPTWG
NHPKVFTLAGLSVKSYRYYDPATRGLNFQGLLEDLGSAPSGAVVLLHACAHNPTGVDPTI
DQWEQIRRLMRSRGLLPFFDSAYQGFASGSLDTDAQSVRMFVADGGEVLVAQSYAKNMGL
YGERVGALSIVCRNADVASRVESQLKLVIRPMYSNPPIHGASIVATILKDRNMYREWTLE
LKAMADRIIRMRQQLFDALRARGTPGDWSHIIKQIGMFTFTGLNSEQVAFMTKEYHIYMT
SDGRISMAGLSSRTVPHLADAIHAAVARAR

Transcript Sequence

Gene sequence data has not been registered.